Installation

This guide will walk you through installing MiTo, including setting up the necessary environment.

Install mamba (or conda)

First, install mamba for fast and reliable package management:

Install mamba (or conda)

Clone MiTo repository

Clone the MiTo repository from GitHub:

git clone https://github.com/andrecossa5/MiTo.git

Reproduce MiTo conda environment

Navigate to the MiTo directory and create the conda environment:

cd MiTo
mamba env create -f envs/environment.yml -n MiTo

Activate environment and install MiTo

Activate the environment and install MiTo via PyPI:

mamba activate MiTo
pip install mito_utils

Verify installation

To verify a successful installation, import MiTo in Python:

import mito as mt